SubtiBank SubtiBank
pucG [2018-09-12 18:44:10]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

pucG [2018-09-12 18:44:10]

(S)-ureidoglycine-glyoxylate aminotransferase
locus
BSU32520
pI
5.42
mw
45.58 kDa
protein length
416 aa Sequence Blast
gene length
1248 bp Sequence Blast
function
purine utilization
product
(S)-ureidoglycine-glyoxylate aminotransferase
essential
no
synonyms
yurG
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.5|Nucleotide metabolism] → [category|SW 2.5.1|Utilization of nucleotides]

    • Gene

    Coordinates
    3,341,166 → 3,342,416

    The protein

    Catalyzed reaction/ biological activity

  • transamination between an unstable intermediate ((S)-ureidoglycine) and the end product of purine catabolism (glyoxylate) to yield oxalurate and glycine [Pubmed|20852637]

    • Protein family

  • class-V pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)

    • Structure

  • [PDB|3ISL] [Pubmed|20852637]

    • Expression and Regulation

    Operons

    genes
    [gene|C314CE9D194E8894430368C5F69C0778D45A651C|pucF]-[gene|4BC4B3E0AB4779D1DD5EDF591361FC1094AF661F|pucG]
    description
    [Pubmed|12029039]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|12029039], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|52C1601482C26400A524E880334BB801F832D6ED|PucR]: activation, [Pubmed|12029039], in [regulon|52C1601482C26400A524E880334BB801F832D6ED|PucR regulon]

    • regulation

  • induced in the presence of purine nucleotides (inducer: allantoin) ([protein|search|PucR]) [Pubmed|12029039]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A942 (yurG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/942 NBRP B. subtilis, Japan]
  • BKE32520 (Δ[gene|4BC4B3E0AB4779D1DD5EDF591361FC1094AF661F|pucG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE32520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCCTGACACAGCCATTCCTC, downstream forward: _UP4_TAAAGAAAAGCTTGCGGAAC
  • BKK32520 (Δ[gene|4BC4B3E0AB4779D1DD5EDF591361FC1094AF661F|pucG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK32520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCCTGACACAGCCATTCCTC, downstream forward: _UP4_TAAAGAAAAGCTTGCGGAAC

    • References

  • 11344136,20852637,12029039